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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891687.1_cds_XP_016446543.1_41390
CDS Infomation

[gene=LOC107771632] [db_xref=GeneID:107771632] [protein=non-functional pseudokinase ZED1-like isoform X1] [protein_id=XP_016446543.1] [location=complement(join(53842..54596,54748..55030))] [gbkey=CDS]
Sequence

ATGGATTGCATAAGGAAGATGTTGTCACTCTTGAAGAAATTTAGGAAGGAAGAAGAAGAT
GTAGAAAATCTGTTCCTACAAAATGGAAGTGCGCTGTTGGAAGAGCTTATTTCTTTTTCT
GGTGGAACATATGACATTCCCATCCGTAGTTACAGTGCTCAAGAACTTGTTAAGGCAACA
AACAACTTCGCTGGACGTGTCCATGCTAGCACCTACGGTTACATCTGTAGAGGAACTCTG
CAAGGGCGCTCTATCTTGGTCAAAATGTTCATAAATTTTCCAGGTAACCCTGCCTCACAT
TCCGACTTTGACATTCTTGCTGGAGCTGTACGTGACATTGCAGTCACATCACTAATGAGC
GGAAATAGGAATGTTATAAAGATTATAGGTTGCTGTTTGGAATTCACTTATCCAGCACTA
GTGTATGAGGATGCCAGATTTGAGATTCTCGCTAATTTCCTTGACCCCAATTGCGATAAA
TTGTTAAGTTGGAAAAGTAGATTGAAGATTGCCAAAAGCATTGCCAGTGCAATTCTTTAT
CTACACACTGCATTTCCAACTCCCATTATCTACAGGATCTTGAATCCCCATAACATTATC
TTGGACCATCATTGCGTTCCCAAACTGTTTGATTTCTCATTTGTTATTTCTCTTCCTCCT
GGAGAGTTGCAAGTGGAAGATGACTTGATTTGGATTCCTGGCTATTTCGATCCAGAGTAC
CAATCTTCAAGGTTTGTCACTCAAAAGACCGATGTCTATAGTTTTGGTGTGCTTCTACTG
GTGCTCTTAAATGGACAGGGTCCTATATGCAGGGCCAATGAAGGTGATCCAGAACACATT
GTGAATTATGTAAATGACCATATTCAGAAGGACGATCAATTCAAGCAGATCGTGGACCCT
AAAATCTTGAAGGAATCGAGTGTAAATCATCGACAGCTACAAGCTTTCATTAATATCGCT
TTAAGATGTGTCCAGGCTAAGGGAGAAAATAGACCAGATATGCTCGATATTGCAAGAAAG
ATCCTGCAATTTGAGTAA

Peptide Sequence

PEP ID

XP_016446543.1
PEP Infomation

PREDICTED: non-functional pseudokinase ZED1-like isoform X1 [Nicotiana tabacum]
Sequence

MDCIRKMLSLLKKFRKEEEDVENLFLQNGSALLEELISFSGGTYDIPIRSYSAQELVKAT
NNFAGRVHASTYGYICRGTLQGRSILVKMFINFPGNPASHSDFDILAGAVRDIAVTSLMS
GNRNVIKIIGCCLEFTYPALVYEDARFEILANFLDPNCDKLLSWKSRLKIAKSIASAILY
LHTAFPTPIIYRILNPHNIILDHHCVPKLFDFSFVISLPPGELQVEDDLIWIPGYFDPEY
QSSRFVTQKTDVYSFGVLLLVLLNGQGPICRANEGDPEHIVNYVNDHIQKDDQFKQIVDP
KILKESSVNHRQLQAFINIALRCVQAKGENRPDMLDIARKILQFE

Transcript Sequence

Gene sequence data has not been registered.